Deliverables

This page contains all of the completed public deliverables of the Khresmoi project displayed in reverse chronological order. Deliverables clustered by topic are available on the scientists, industry, medical professionals and software pages.

D14.1 - Contributions to the relevant management deliverables (08/2014)
This is a “virtual” deliverable inserted into the NEF because the NEF required at least one deliverable for each work package.
Link to the report :Deliverable D14.1

D12.4.2 - Final report on KHRESMOI contribution to standards (08/2014)
This document gives an overview of the KHRESMOI project’s contribution to standards. Contributions were made in the areas of radiology, language resources and health informatics.
Link to the report :Deliverable D12.4.2

D11.3.4 - Final dissemination and training report (08/2014)
This deliverable reports on the dissemination and training activities over the whole Khresmoi project, with a focus on Khresmoi Year 4 (September 2013 – August 2014).
Link to the report :Deliverable D11.3.4

D11.2.2 - Final KHRESMOI web site (08/2014)
This deliverable presents the version of the Khresmoi website at the end of the project.
Link to the report :Deliverable D11.2.2

D10.4 - Report on the results of the large-scale user test of the radiology search system (08/2014)
The KHRESMOI Radiology prototype has been redesigned according to the feedback obtained in the first round of the user–centered evaluation. The outcomes of that study were used to modify the system to include the most frequently requested functionalities and improve the aspects that were less satisfactory.
Link to the report :Deliverable D10.4

D10.3 - Report on the extensive tests with final search system (08/2014)
This document summarizes in detail the results of extensive user evaluation conducted with the final search system, KPro and K4E, in the final year of the project.
Link to the report :Deliverable D10.3

D7.3 - Meta-analysis of the second phase of empirical and user-centered evaluations (08/2014)
In this deliverable we provide a meta-analysis of the evaluations that have been conducted in year 4 of the Khresmoi project, based on the updated evaluation strategy outlined in Deliverable D7.1.2.
Link to the report :Deliverable D7.3

D6.5.3 - Prototype and Evaluation of the "Full KHRESMOI Integrated Infrastructure" (08/2014)
This document describes the evaluation performed over the "Full KHRESMOI Integrated Infrastructure"
Link to the report :Deliverable D6.5.3

D3.7 - Report on results of the WP3 second evaluation phase (06/2014)
In this deliverable we present the results of the second user interface component evaluation phase.
Link to the report :Deliverable D3.7

D1.8 - Report on results of the WP1 second evaluation phase (06/2014)
This report describes evaluations conducted on semantic annotation, categorisation, and recommender systems in the Khresmoi roject.
Link to the report :Deliverable D1.8

D2.7 - Report on results of the second evaluation phase (06/2014)
In this deliverable we report the quantitative evaluation of individual core components of image based retrieval.
Link to the report :Deliverable D2.7

D4.7 - Report on results of the WP4 second evaluation phase (06/2014)
This document reports on the results of the second evaluation phase of WP4 focused primarily on translation of medical document summaries and partially also on translation of medical queries.
Link to the report :Deliverable D4.7
Link to additional document :Wmt 2014 findings

D5.6 - Report on results of second phase scalability and performance evaluation (06/2014)
Deliverable D5.6 reports on the performance and scalability results of Khresmoi Biomedical Knowledge Server (KS)
Link to the report :Deliverable D5.6

D4.6 - Machine translation techniques for presentation of summaries (04/2014)
This deliverable reports on the Khresmoi activity to provide machine translation of document summaries. We develop systems for translation of English summaries into Czech, French, and German.
Link to the report :Deliverable D4.6

D6.2 - Public version and updated report on the KHRESMOI data collection (02/2014)
This deliverable is a final report on the activities related to the identification, rights negotation, crawling and preparation of data resources carried out within the Khresmoi project.
Link to the report :Deliverable D6.2

D3.6 - Final flexible user Interface framework and documentation (02/2014)
This report describes the flexible user interface framework developed as part of the Khresmoi project.
Link to the report :Deliverable D3.6

D3.5 - Report on user interface adaptations for handicapped people (02/2014)
This document contains information about accessibility providing adaptations to the user interfaces for the Khresmoi for Everyone Professional prototypes.
Link to the report :Deliverable D3.5

D2.6 - Report on and prototype of final Image Retrieval and Analysis Framework (02/2014)
This deliverable describes the Khresmoi prototype framework for image retrieval and analysis.
Link to the report :Deliverable D2.6

D1.7 - Prototype and report on semantic indexing and annotation for information retrieval (02/2014)
This deliverable is the final report on the semantic indexing and annotation efforts within the Khresmoi project.
Link to the report :Deliverable D1.7

D8.5.2 - Prototype of a second search system based on feedback (12/2013)
This deliverable provides a brief description and an update on the two prototypes developed in a framework of the Khresmoi project. These prototypes are Khresmoi for Everyone and Khresmoi Professional.
Link to the report :Deliverable D8.5.2

D9.4.2 - Updated prototype incorporating updated specifications and innovative user interface (12/2013)
This deliverable describes the latest version of the Khresmoi Radiology prototype.
Link to the report :Deliverable D9.4.2

D13.3.4 - Public annual report 4 (11/2013)
This deliverable reports on what has been done in the Khresmoi project during year 3.
Link to the report :Deliverable D13.3.4

D6.5.2 - Evaluation of the ‘Early Integrated Infrastructure’ (10/2013)
This document describes the evaluation performed over the "Early Integrated Infrastructure", which can be considered as the result of joining the “Full Software architecture” deployed within the “Full Cloud Prototype” to achieve scalability, flexibility and elasticity requirements.
Link to the report :Deliverable D6.5.2

D1.5 - Report on reference identification component (08/2013)
This deliverable presents an approach for linking named entities from information extraction to resources in the Khresmoi Knowledge Base.
Link to the report :Deliverable D1.5

D1.6 - Report on automatic document categorization, trustability and readability (08/2013)
This deliverable reports on the update of the automatic categorization and present advances on the readability and trustability detection in the task T.1.5 Categorization, Trustability and Readability in the KHESMOI WP1 Large Scale Biomedical Text Mining and Search.
Link to the report :Deliverable D1.6

D2.5 - Report on the anatomical structure identification and localization (08/2013)
This deliverable describes the computational framework for the identification and localization of anatomical structures in medical imaging data.
Link to the report :Deliverable D2.5

D3.4 - Report on user input for updating resources (08/2013)
This deliverable describes the collaborative functionalities developed within Work Package 3 of the Khresmoi project. They include “social” components on the interface, allowing users obtain a personal profile and interact with each other.
Link to the report :Deliverable D3.4

D6.4.3 - Prototype and evaluation of the “Full Cloud Infrastructure” (08/2013)
This document aims to report on the final assessment of the Khresmoi Full Cloud Infrastructure, which is directly aligned with previous work described in Deliverable 6.4.2, in which the Early Cloud Prototype was presented.
Link to the report :Deliverable D6.4.3

D8.4 - Report on and prototype of mobile information access system (08/2013)
This deliverable presents a review of the mobile requirements of health searchers and health-care professionals and describes two mobile applications, that were build using the resources, services and infrastructure developed within the Khresmoi project.
Link to the report :Deliverable D8.4

D11.3.3 - Dissemination and training report for year 3 (08/2013)
This deliverable reports, in Part I, on the dissemination and training activities in Khresmoi Year 3 (September 2012 – August 2013). In Part II, a plan for the dissemination and training activities for the remaining year is presented.
Link to the report :Deliverable D11.3.3

D5.4 - Report on consistency checking rules for information extraction (05/2013)
In this deliverable we describe the application of the Khresmoi Knowledge Base to two radiology use cases – the modality classification of images and their retrieval. In order to achieve this we made use of an domain ontology and semantic information extraction techniques.
Link to the report :Deliverable D5.4

D1.4.1 - Report accompanying Manually Annotated Reference Corpus (05/2013)
The Khresmoi project is building a multi-lingual search and access system for biomedical information and documents. The project is using automatic recognition of medical entities in text, such as Disease and Drugs, to assist with that search. Automatic recognition of these entities is trained by manual correction of machine annotations. This correction leads to the construction of a corpus of manually corrected documents, which may be of use in other biomedical NLP tasks.
Link to the report :Deliverable D1.4.1

D1.4.2 - Report on Coupling Manual and Automatic Annotation (05/2013)
This deliverable reports on Coupling Manual and Automatic Annotation. An initial set of automatic annotations are corrected, these corrections are used to improve tha automatic application, this improved application is then used to generate further annotations for correction.
Link to the report :Deliverable D1.4.2

D10.1 - Report on user tests with initial search system (04/2013) (updated 09/2013)
This deliverable reports on user tests conducted from October to March 2013 in the EU funded project Khresmoi (2010-2014). The goal of these evaluations was to collect the end-users’feedback on the prototypes developed during the first two years of the project.
Link to the report :Deliverable D10.1 UPDATED

D10.2 - Report on the results of the initial user test of the radiology search system (04/2013)
This deliverable describes the first round user–oriented evaluation of the KHRESMOI system prototype by radiologists. The design aspects, the setup details and the results are presented and analysed.
Link to the report :Deliverable D10.2

D2.4 - Report on the robust learning from incomplete and spurious data (02/2013)
This deliverable describes methodology for the computational learning from medical imaging data developed in the KHRESMOI project.
Link to the report :Deliverable D2.4

D3.3 - Report on query specification, result presentation and personalization (02/2013)
This deliverable describes the query support, result presentation and personalization components of the Khresmoi user interface.
Link to the report :Deliverable D3.3

D4.4 - Report on summarization techniques (02/2013)
In this document we describe a summarizer for text documents, developed at Dublin City University (DCU), Ireland for the Khresmoi project.
Link to the report :Deliverable D4.4

D6.3.3 - Prototype and evaluation of the “Full software architecture” (02/2013)
Deliverable D6.3.3 of the KHRESMOI project describes the full software architecture prototype deployed that has been achieved after several months of coordinated work within the project.
Link to the report :Deliverable D6.3.3

D6.5.1 - Specification of the “Early Integrated infrastructure” (02/2013)
This document reports on the outcome of the T6.4 task related to the definition of the main integration aspects for the KHRESMOI project.
Link to the report :Deliverable D6.5.1

D6.4.2 - Evaluation of the “Early Cloud Infrastructure” and specification refinement for the “Full Cloud infrastructure" (11/2012)
Deliverable D6.4.2 of the KHRESMOI project describes evaluation of the “Early Cloud Infrastructure” and specification refinement for the “Full Cloud Infrastructure”.
Link to the report :Deliverable D6.4.2

D13.3.3 - Public annual report 3 (11/2012)
This deliverable reports on what has been done in the Khresmoi project during year 2.
Link to the report :Deliverable D13.3.3

D11.3.2 - Dissemination and training report for year 2 (08/2012)
This deliverable reports, in Part I, on the dissemination and training activities in Khresmoi year 2 (September 2011 – August 2012). In Part II, a plan for the dissemination and training activities for the remaining two years, with an emphasis on year 3, is presented.
Link to the report :Deliverable D11.3.2

D1.3 - Report on results of the WP1 first evaluation phase (08/2012) - Updated (10/2012)
This deliverable provides information on the manual annotation tasks that are being carried out by a team of professional annotators at a Khresmoi sub-contractor, Lighthouse, in the Philippines and managed by a team at The University of Sheffield in the UK.
Link to the report :Deliverable D1.3

D2.3 - Report on results of the WP2 first evaluation phase (08/2012)
This deliverable reports the results of the first evaluation phase of KHESMOI WP2 Large Scale Biomedical Image Mining and Search. The objective of the workpackage is to provide methods, algorithms, and tools to perform fast and accurate content-based image retrieval withinthe KHRESMOI prototype.
Link to the report :Deliverable D2.3

D3.2 - Report on results of the WP3 first evaluation phase (08/2012)
This deliverable presents the report on the first interface component evaluation phase for the Khresmoi search system. It describes a number of formative usability and learn-ability evaluations that were conducted, some using an eye-tracking system, as well as experiments comparing different variants of interface components for effectiveness and efficiency.
Link to the report :Deliverable D3.2

D4.3 - Report on results of the WP4 first evaluation phase (08/2012)
This paper reports on the results of the first evaluation phase of Khresmoi WP4. We describe and analyse the first half of the project in the area of resource acquisition and analysis for training the Khresmoi Machine Translation component.
Link to the report :Deliverable D4.3

D5.3 - Scalability and performance evaluation report (08/2012)
Deliverable D5.3 reports on the performance and scalability results of Khresmoi Biomedical Knowledge Server (KS).
Link to the report :Deliverable D5.3

D8.3 - Prototype of a first search system for intensive tests (08/2012)
This deliverable presents an overview of the current state of the prototypes developed in the Khresmoi project for the medical professional and general public use case, and provides links to execute these prototypes.
Link to the report :Deliverable D8.3

D1.2 - Report on initial prototype for semantic annotation of the Khresmoi literature (05/2012) - Updated (10/2012)
This deliverable describes the prototype for the semantic annotation of the Khresmoi document collection.
Link to the report :Deliverable D1.2

D2.2 - Report on and prototype for feature extraction and image description (05/2012)
This deliverable encompasses the prototype and description of the feature extraction, and image description for content based medical image retrieval in the KHRESMOI project.
Link to the report :Deliverable D2.2

D3.1 - Report on and prototype of the translation support (05/2012)
This deliverable describes the introduction of translation support within the Khresmoi system.
Link to the report :Deliverable D3.1

D6.3.2 - Report on evaluation of the "Early software architecture" and further specification (05/2012)
This deliverable describes the approach that has been followed for the evaluation of the “Early Software Architecture”.
Link to the report :Deliverable D6.3.2

D4.1.2 - Report on and prototype of multilingual information extraction (02/2012)
This deliverable concludes the effort made within the multilingual work-package (WP4) on the task of information extraction, especially in the context of deep linguistic analysis.
Link to the report :Deliverable D4.1.2

D8.2 - Use case definition including concrete data requirements (02/2012)
This document illustrates use cases of how layman users and physicians would use Khresmoi for an online health information search.
Link to the report :Deliverable D8.2

D4.2 - Analyzed parallel corpus from the biomedical domain (02/2012)
This deliverable concludes the work on training a Czech/English Statistical Machine Translation system conducted at CUNI in Year 1 of Khresmoi in the multilingual workpackage (WP4)
Link to the report :Deliverable D4.2

D6.4.1 - State of the art, concepts and specification for the “Early Cloud infrastructure” (11/2011)
This deliverable describes the approach that will be followed for the definition and deployment of the Early Cloud Prototype giving solutions satisfying the system scaling requirement.
Link to the report :Deliverable D6.4.1

D13.3.2 - Public Annual Report 2 (11/2011)
This deliverable reports on what has been done in the Khresmoi project after one year.
Link to the report :Deliverable D13.3.2

D5.1 - Report on data source integration (08/2011)
This deliverable reports on the progress of the tasks T5.1 “Biomedical knowledge server” and T5.2 “Knowledge base creation”. The document specifies the developments in the context of WP5 – Biomedical Knowledge Engine Server or simply Knowledge Engine (KE), which is considered a key component of the overall Khresmoi architecture.
Links: Deliverable D5.1

D8.1.2 - Requirements document for health professional search (08/2011)
The following report provides a summary of relevant background literature, and results obtained in a survey conducted within the EU Project KHRESMOI, on the information requirements and online search behavior of medical health professionals.
Links: Deliverable D8.1.2

11.3.1 - Dissemination and training report for year 1 (08/2011)
This deliverable reports, in Part I, on the dissemination and training activities in KHRESMOI year 1 (September 2010 – August 2011). In Part II, a plan for the dissemination and training activities for the remaining three years, with a focus on year 2, is presented.
Links: Deliverable D11.3.1

6.3.1 - State of the art, concepts and specification for the “Early software architecture” (05/2011)
This document reports on the foundations of the architecture and integration aspects of the Khresmoi project. This includes the technical and functional requirements that imply technical choices and integration decisions for the architecture design.
Links: Deliverable D6.3.1

8.1.1 - Requirements document for the general public health search (05/2011)
This report presents the results of the survey conducted by the Health on the net (HON) Foundation in the framework of the EU project KHRESMOI. The aim of the survey was to identify the most important user requirements and difficulties in a process of online health information retrieval to be further used for use case elaboration.
Links: Deliverable D8.1.1

9.1 - Report on image use behavior and requirements (05/2011)
This report describes the methodology for constructing a survey among radiologists on image search behaviour and analyses the results obtained.
Links: Deliverable D9.1

11.2.1 - Initial KHRESMOI web site (11/2010)
The Khresmoi web site is based on Silverstripe open source technology allowing very easy modification functionalities and maintenance.
 Links: Khresmoi web site Links: Deliverable D11.2.1

D13.3.1 - Public Annual Report 1 (11/2010)
This section includes the Public Annual Report and its annexes.
Link to the media page and the factsheets : http://www.khresmoi.eu/media-center/ 
Link to the report and annexes: D13.3.1Kick-Off invitationEnglish press releaseGerman press releaseAustrian press releaseDiagram

D11.1 - Brief project fact sheet suitable for web publishing (09/2010)
The Khresmoi factsheet represents the project main aspects in an easy readable way and in three different languages. They are provided in .pdf format for easy dissemination.
Links: English version - German version - French version